Tools

The following are a list of tools that may be particularly useful to members of our community:

RNA-Seq Power/Sample Size Calculation

• RNASeqPower – https://bioconductor.org/packages/release/bioc/html/RNASeqPower.html
• RSPS – https://rdrr.io/cran/RSPS/
• RNASeqPowerCalculator – http://www2.hawaii.edu/~lgarmire/RNASeqPowerCalculator.htm
• PROPER – https://www.bioconductor.org/packages/release/bioc/html/PROPER.html
• Scotty – http://scotty.genetics.utah.edu/
• ssizeRNA – https://rdrr.io/cran/ssizeRNA/man/ssizeRNA_vary.html
• RnaSeqSampleSize – https://cqs.mc.vanderbilt.edu/shiny/RnaSeqSampleSize/
• SSPA – https://www.bioconductor.org/packages/release/bioc/html/SSPA.html

See Feasibility of sample size calculation for RNA-seq studies for more information.